Escherichia coli str. SP-16 Combo

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SP-16 Combo is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain is adapted to a host-associated habitat, indicating a potential association with specific biological environments, such as the gastrointestinal tract of animals or humans. E. coli SP-16 Combo demonstrates facultative anaerobic metabolism, allowing it to thrive in both oxygen-rich and low-oxygen conditions, which is a common characteristic of many E. coli strains. The optimal growth temperature for E. coli SP-16 Combo is 37.0 °C, which is consistent with the physiological temperature of warm-blooded hosts, further emphasizing its adaptation to a host-associated lifestyle. This temperature preference suggests that E. coli SP-16 Combo may play a role in the microbial community dynamics within its host environment, potentially influencing nutrient cycling and microbial interactions. Understanding the traits of E. coli SP-16 Combo can offer insights into its ecological roles, particularly in relation to its interactions with the host's immune system and other microbial species. Its facultative anaerobic nature may provide it with a competitive advantage in fluctuating oxygen conditions within the host, contributing to its persistence and adaptability in complex microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. SP-16 Combo
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. SP-16 Combo

Accession NumberPOSU00000000.1

Gene Summary

Adenine Count

1503507 bp

Thymine Count

1502171 bp

Guanine Count

1534771 bp

Cytosine Count

1540882 bp

Genome Length

6081331 bp

Protein-coding Genes

7256 genes

Non-Coding Genes

466 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gdp-mannose 4,6 dehydrataseC1I57_34415Not Available-5684388 - 568487818349.1
galactosamine-6-phosphate isomeraseC1I57_34420Not Available-5684879 - 568536918182.0
hypothetical proteinC1I57_34425Not Available-5685390 - 56855877092.56
type i toxin-antitoxin system ibs family toxinC1I57_34430Not Available+5685568 - 56856272241.07
hypothetical proteinC1I57_34435Not Available-5685881 - 56860787003.46
small toxic protein ibsdC1I57_34440Not Available+5686059 - 56861182150.99
acyl-coa hydrataseC1I57_34445Not Available-5686352 - 568684017996.1
acyl-coa hydrataseC1I57_34450Not Available-5686841 - 568732917930.1
poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaaC1I57_34455Not Available-5687330 - 568781818393.7
poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaaC1I57_34460Not Available-5687819 - 568830718239.4

Displaying genes 6601 – 6610 of 7722 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites