Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. SP-16 Combo
Accession NumberPOSU00000000.1
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proq/fino family protein | C1I57_00485 | Not Available | - | 79212 - 79814 | 22449.8 |
| Trna-asn | Not Available | Not Available | + | 83188 - 83263 | Not Available |
| duf4102 domain-containing protein | C1I57_00510 | Not Available | + | 83425 - 84696 | 48809.2 |
| hypothetical protein | C1I57_00515 | Not Available | - | 84698 - 84946 | 9219.05 |
| colibactin self-protection protein clbs | C1I57_00520 | Not Available | - | 84976 - 85488 | 19651.6 |
| colibactin biosynthesis thioesterase clbq | C1I57_00525 | Not Available | - | 85523 - 86245 | 27337.0 |
| precolibactin peptidase clbp | C1I57_00530 | Not Available | - | 86238 - 87743 | 55130.2 |
| colibactin polyketide synthase clbo | C1I57_00535 | Not Available | - | 87765 - 90224 | 89568.7 |
| o-succinylbenzoate--coa ligase | C1I57_00540 | Not Available | - | 90255 - 94622 | 162080.0 |
| precolibactin export mate transporter clbm | C1I57_00545 | Not Available | - | 94619 - 96058 | 52865.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism