Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. SP-16 Combo
Accession NumberPOSU00000000.1
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | C1I57_00320 | Not Available | - | 57400 - 58569 | 44924.5 |
| shufflon protein c | C1I57_00325 | Not Available | + | 58624 - 58896 | 10101.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C1I57_00335 | Not Available | - | 59184 - 60548 | 49011.6 |
| prepilin peptidase | C1I57_00340 | Not Available | - | 60553 - 61188 | 23045.3 |
| lytic transglycosylase | C1I57_00345 | Not Available | - | 61207 - 61680 | 17765.6 |
| prepilin-type cleavage/methylation domain-containing protein | C1I57_00350 | Not Available | - | 61734 - 62270 | 19352.3 |
| type ii secretion protein f | C1I57_00355 | Not Available | - | 62344 - 63444 | 41047.3 |
| type ii secretion protein e | C1I57_00360 | Not Available | - | 63446 - 64954 | 56170.2 |
| type iv pilus biogenesis protein pilp | C1I57_00365 | Not Available | - | 65039 - 65491 | 16351.6 |
| pilus assembly protein | C1I57_00370 | Not Available | - | 65481 - 66776 | 47733.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism