Escherichia coli str. SP-16 Combo

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SP-16 Combo is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain is adapted to a host-associated habitat, indicating a potential association with specific biological environments, such as the gastrointestinal tract of animals or humans. E. coli SP-16 Combo demonstrates facultative anaerobic metabolism, allowing it to thrive in both oxygen-rich and low-oxygen conditions, which is a common characteristic of many E. coli strains. The optimal growth temperature for E. coli SP-16 Combo is 37.0 °C, which is consistent with the physiological temperature of warm-blooded hosts, further emphasizing its adaptation to a host-associated lifestyle. This temperature preference suggests that E. coli SP-16 Combo may play a role in the microbial community dynamics within its host environment, potentially influencing nutrient cycling and microbial interactions. Understanding the traits of E. coli SP-16 Combo can offer insights into its ecological roles, particularly in relation to its interactions with the host's immune system and other microbial species. Its facultative anaerobic nature may provide it with a competitive advantage in fluctuating oxygen conditions within the host, contributing to its persistence and adaptability in complex microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. SP-16 Combo
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. SP-16 Combo

Accession NumberPOSU00000000.1

Gene Summary

Adenine Count

1503507 bp

Thymine Count

1502171 bp

Guanine Count

1534771 bp

Cytosine Count

1540882 bp

Genome Length

6081331 bp

Protein-coding Genes

7256 genes

Non-Coding Genes

466 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
l-threonine 3-dehydrogenaseC1I57_05890Not Available-1078316 - 107934137257.3
glycine c-acetyltransferaseC1I57_05895Not Available-1079351 - 108054743135.5
adp-l-glycero-d-mannoheptose-6-epimeraseC1I57_05900Not Available+1080761 - 108169334896.0
adp-heptose--lps heptosyltransferase rfafC1I57_05905Not Available+1081703 - 108274939015.3
lipopolysaccharide heptosyltransferase rfacC1I57_05910Not Available+1082753 - 108373336223.5
ligaseC1I57_05915Not Available-1083803 - 108505646774.3
glycosyltransferase family 2 proteinC1I57_05920Not Available-1085102 - 108608538718.4
udp-galactose--(galactosyl) lps alpha1,2-galactosyltransferaseC1I57_05925Not Available-1086167 - 108719539463.0
lipopolysaccharide core heptose(ii) kinase rfayC1I57_05930Not Available-1087221 - 108791326996.8
lipopolysaccharide 1,2-glucosyltransferaseC1I57_05935Not Available-1087923 - 108891838420.8

Displaying genes 1321 – 1330 of 7722 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites