Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein yrha | E5M00_RS01970 | Not Available | - | 398249 - 398743 | 19018.5 |
| hcp1 family type vi secretion system effector | E5M00_RS01975 | Not Available | - | 398740 - 399918 | 44303.9 |
| n-acetyltransferase | E5M00_RS01980 | Not Available | - | 400155 - 400643 | 18794.6 |
| oxidoreductase | E5M00_RS01985 | Not Available | + | 400976 - 402013 | 38767.1 |
| quercetin 2,3-dioxygenase | E5M00_RS01990 | Not Available | + | 402136 - 402831 | 26280.8 |
| gluconate operon transcriptional repressor gntr | E5M00_RS01995 | Not Available | + | 403055 - 404050 | 36359.2 |
| gluconokinase | E5M00_RS02000 | Not Available | + | 404189 - 404716 | 19544.4 |
| gluconate transporter | E5M00_RS02005 | Not Available | + | 404720 - 406060 | 46418.9 |
| naat family transporter yhgn | E5M00_RS02010 | Not Available | - | 406117 - 406710 | 21491.9 |
| aspartate-semialdehyde dehydrogenase | E5M00_RS02015 | Not Available | + | 406902 - 408005 | 40020.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism