Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalase | E5M00_RS01430 | Not Available | - | 277967 - 279616 | 63700.1 |
| cytochrome c peroxidase | E5M00_RS01435 | Not Available | + | 280020 - 281417 | 51573.3 |
| glutamate decarboxylase | E5M00_RS01440 | Not Available | + | 281628 - 283028 | 52688.0 |
| acid resistance transcriptional activator gadx | E5M00_RS01445 | Not Available | + | 283398 - 284222 | 31564.3 |
| acid resistance transcriptional activator gadw | E5M00_RS01450 | Not Available | + | 284590 - 285318 | 28030.0 |
| multidrug efflux pump rnd permease mdtf | E5M00_RS01455 | Not Available | - | 285681 - 288794 | 111524.0 |
| multidrug transporter subunit mdte | E5M00_RS01460 | Not Available | - | 288819 - 289928 | 39309.4 |
| hypothetical protein | E5M00_RS01465 | Not Available | + | 290036 - 290314 | 9789.79 |
| acid resistance transcriptional activator gade | E5M00_RS01470 | Not Available | - | 290315 - 290842 | 20600.6 |
| acid-resistance protein hded | E5M00_RS01475 | Not Available | - | 291641 - 292213 | 20904.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism