Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | E5M00_RS26345 | Not Available | - | 59334 - 59948 | 24309.7 |
| duf1883 domain-containing protein | E5M00_RS26350 | Not Available | + | 60117 - 60884 | 28401.8 |
| helix-turn-helix domain-containing protein | E5M00_RS28140 | Not Available | - | 61051 - 61146 | 3608.19 |
| type ii toxin-antitoxin system rele/pare family toxin | E5M00_RS26355 | Not Available | - | 61252 - 61527 | 10750.1 |
| copg family ribbon-helix-helix protein | E5M00_RS26360 | Not Available | - | 61527 - 61811 | 10507.6 |
| incfii family plasmid replication initiator repa | E5M00_RS26375 | Not Available | - | 62898 - 63755 | 32772.7 |
| repa leader peptide tap | E5M00_RS26380 | Not Available | - | 63748 - 63822 | 2699.38 |
| hypothetical protein | E5M00_RS28145 | Not Available | + | 63871 - 63996 | 4675.91 |
| replication regulatory protein repa | E5M00_RS26390 | Not Available | - | 64069 - 64317 | 9094.92 |
| hok/gef family protein | E5M00_RS26395 | Not Available | - | 64601 - 64750 | 5512.98 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism