Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnl | E5M00_RS23990 | Not Available | + | 4779239 - 4779919 | 24690.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | E5M00_RS23995 | Not Available | + | 4779916 - 4781052 | 42110.0 |
| ribose 1,5-bisphosphokinase | E5M00_RS24000 | Not Available | + | 4781052 - 4781609 | 20714.8 |
| aminoalkylphosphonate n-acetyltransferase | E5M00_RS24005 | Not Available | + | 4781596 - 4782030 | 16570.8 |
| phosphonate metabolism protein phnp | E5M00_RS24010 | Not Available | + | 4782032 - 4782790 | 27755.2 |
| ddrrrql repeat protein yjdp | E5M00_RS24015 | Not Available | - | 4782937 - 4783266 | 13441.3 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | E5M00_RS24020 | Not Available | - | 4783335 - 4783784 | 16074.3 |
| d-allose utilization transcriptional regulator alsr | E5M00_RS24025 | Not Available | + | 4784143 - 4785033 | 32364.1 |
| d-allose transporter substrate-binding protein | E5M00_RS24030 | Not Available | + | 4785092 - 4786027 | 32911.7 |
| d-allose abc transporter atp-binding protein alsa | E5M00_RS24035 | Not Available | + | 4786154 - 4787686 | 56748.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism