Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family metalloprotein yjdn | E5M00_RS23940 | Not Available | + | 4771401 - 4771844 | 16172.2 |
| phosphonate abc transporter atp-binding protein | E5M00_RS23945 | Not Available | + | 4771977 - 4772765 | 29446.4 |
| dknyy family protein | E5M00_RS23950 | Not Available | + | 4772790 - 4773806 | 37244.4 |
| phosphonate abc transporter, permease protein phne | E5M00_RS23955 | Not Available | + | 4773912 - 4774691 | 28385.3 |
| phosphonate metabolism transcriptional regulator phnf | E5M00_RS23960 | Not Available | + | 4774712 - 4775437 | 27593.0 |
| phosphonate c-p lyase system protein phng | E5M00_RS23965 | Not Available | + | 4775438 - 4775890 | 16554.7 |
| phosphonate c-p lyase system protein phnh | E5M00_RS23970 | Not Available | + | 4775887 - 4776471 | 20970.6 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | E5M00_RS23975 | Not Available | + | 4776471 - 4777535 | 38863.0 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | E5M00_RS23980 | Not Available | + | 4777528 - 4778373 | 31892.0 |
| phosphonate c-p lyase system protein phnk | E5M00_RS23985 | Not Available | + | 4778370 - 4779128 | 27818.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism