Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial major subunit fima | E5M00_RS22020 | Not Available | - | 4415425 - 4415973 | 18112.2 |
| type 1 fimbria switch dna invertase fime | E5M00_RS22025 | Not Available | - | 4416456 - 4417052 | 23117.6 |
| type 1 fimbria switch dna invertase fimb | E5M00_RS22030 | Not Available | - | 4417530 - 4418132 | 22994.8 |
| n-acetylneuraminic acid outer membrane channel nanc | E5M00_RS22035 | Not Available | + | 4419588 - 4420304 | 27889.4 |
| n-acetylneuraminate epimerase | E5M00_RS22040 | Not Available | + | 4420324 - 4421430 | 39574.3 |
| 9-o-acetyl-n-acetylneuraminic acid deacetylase | E5M00_RS22045 | Not Available | + | 4421495 - 4422475 | 36879.9 |
| dknyy family protein | E5M00_RS28075 | Not Available | + | 4422585 - 4422790 | 7772.55 |
| dknyy family protein | E5M00_RS22050 | Not Available | - | 4423058 - 4424298 | 47450.4 |
| hypothetical protein | E5M00_RS28080 | Not Available | + | 4424414 - 4424545 | 4869.85 |
| yjhx family toxin | E5M00_RS22060 | Not Available | + | 4425036 - 4425293 | 9734.88 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism