Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | E5M00_RS21775 | Not Available | - | 4361408 - 4363063 | 59471.5 |
| homoprotocatechuate degradation operon regulator hpar | E5M00_RS21780 | Not Available | - | 4363182 - 4363628 | 17255.8 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | E5M00_RS21785 | Not Available | + | 4363900 - 4365189 | 47084.0 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | E5M00_RS21790 | Not Available | + | 4365186 - 4366652 | 53045.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | E5M00_RS21795 | Not Available | + | 4366654 - 4367505 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | E5M00_RS21800 | Not Available | + | 4367515 - 4367895 | 14360.3 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | E5M00_RS21805 | Not Available | + | 4367963 - 4368766 | 29716.5 |
| 4-hydroxy-2-oxoheptanedioate aldolase | E5M00_RS21810 | Not Available | + | 4368777 - 4369565 | 28057.8 |
| 4-hydroxyphenylacetate permease | E5M00_RS21815 | Not Available | + | 4369689 - 4371065 | 50585.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | E5M00_RS21820 | Not Available | + | 4371075 - 4371965 | 34332.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism