Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | E5M00_RS21235 | Not Available | + | 4246318 - 4247820 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | E5M00_RS21240 | Not Available | + | 4248105 - 4248800 | 25520.3 |
| dna polymerase ii | E5M00_RS21245 | Not Available | + | 4248875 - 4251226 | 90057.6 |
| rna polymerase-associated protein rapa | E5M00_RS21250 | Not Available | + | 4251391 - 4254297 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | E5M00_RS21255 | Not Available | + | 4254309 - 4254968 | 24893.1 |
| co-chaperone djla | E5M00_RS21260 | Not Available | - | 4255086 - 4255901 | 30567.2 |
| lps assembly protein lptd | E5M00_RS21265 | Not Available | + | 4256156 - 4258510 | 89675.8 |
| peptidylprolyl isomerase sura | E5M00_RS21270 | Not Available | + | 4258563 - 4259849 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | E5M00_RS21275 | Not Available | + | 4259849 - 4260838 | 35115.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | E5M00_RS21280 | Not Available | + | 4260835 - 4261656 | 30422.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism