Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system export apparatus subunit sctt | E5M00_RS05780 | Not Available | + | 1146146 - 1146913 | 28269.0 |
| dknyy family protein | E5M00_RS05785 | Not Available | + | 1146922 - 1148042 | 42449.6 |
| invasion protein | E5M00_RS05795 | Not Available | - | 1148104 - 1148397 | 11098.3 |
| helix-turn-helix transcriptional regulator | E5M00_RS05800 | Not Available | - | 1148399 - 1148899 | 19186.1 |
| prgh/eprh family type iii secretion apparatus protein | E5M00_RS05805 | Not Available | + | 1149156 - 1150337 | 45248.8 |
| type iii secretion system needle complex protein | E5M00_RS05810 | Not Available | + | 1150351 - 1150590 | 9038.44 |
| type iii secretion system inner rod subunit scti | E5M00_RS05815 | Not Available | + | 1150610 - 1150942 | 12216.5 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | E5M00_RS05820 | Not Available | + | 1150939 - 1151673 | 27625.7 |
| type iii secretion apparatus protein orga/mxik | E5M00_RS05825 | Not Available | + | 1151689 - 1152270 | 22720.7 |
| hypothetical protein | E5M00_RS05830 | Not Available | + | 1152212 - 1152919 | 27366.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism