Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase fad-binding subunit xdhb | E5M00_RS05740 | Not Available | - | 1137866 - 1138744 | 31558.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | E5M00_RS05745 | Not Available | - | 1138755 - 1141052 | 82663.0 |
| amidase activator acts | E5M00_RS05750 | Not Available | + | 1141467 - 1142222 | 26578.1 |
| Trna-gly | Not Available | Not Available | + | 1142301 - 1142374 | Not Available |
| protein ygeq | E5M00_RS28210 | Not Available | + | 1142530 - 1143324 | 29514.1 |
| hypothetical protein | E5M00_RS28215 | Not Available | + | 1143391 - 1144140 | 28554.8 |
| dknyy family protein | E5M00_RS28365 | Not Available | + | 1144153 - 1144272 | 4793.21 |
| dknyy family protein | E5M00_RS05765 | Not Available | + | 1144232 - 1145219 | 34591.2 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | E5M00_RS05770 | Not Available | + | 1145209 - 1145874 | 24696.6 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | E5M00_RS05775 | Not Available | + | 1145884 - 1146144 | 9430.85 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism