Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease i | E5M00_RS05345 | Not Available | - | 1051207 - 1051914 | 26710.5 |
| sprt family zinc-dependent metalloprotease | E5M00_RS05350 | Not Available | - | 1052009 - 1052506 | 19349.6 |
| galactose/proton symporter | E5M00_RS05355 | Not Available | - | 1052583 - 1053977 | 50985.6 |
| methionine adenosyltransferase | E5M00_RS05360 | Not Available | - | 1054401 - 1055555 | 41954.0 |
| protein yqgd | E5M00_RS28195 | Not Available | + | 1055611 - 1055862 | 9519.81 |
| protein yqgg | E5M00_RS28200 | Not Available | + | 1055973 - 1056116 | 5220.17 |
| acid stress response protein yqgb | E5M00_RS05375 | Not Available | + | 1056210 - 1056341 | 4859.08 |
| biosynthetic arginine decarboxylase | E5M00_RS05380 | Not Available | + | 1056350 - 1058326 | 73902.7 |
| agmatinase | E5M00_RS05385 | Not Available | + | 1058464 - 1059384 | 33558.9 |
| metalloprotease loip | E5M00_RS05390 | Not Available | - | 1059590 - 1060348 | 26843.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism