Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system atpase gspe | E5M00_RS04370 | Not Available | + | 881364 - 882857 | 55199.7 |
| type ii secretion system inner membrane protein gspf | E5M00_RS04375 | Not Available | + | 882857 - 884080 | 45041.0 |
| type ii secretion system major pseudopilin gspg | E5M00_RS04380 | Not Available | + | 884097 - 884552 | 16663.8 |
| type ii secretion system minor pseudopilin gsph | E5M00_RS04385 | Not Available | + | 884556 - 885119 | 21185.8 |
| type ii secretion system minor pseudopilin gspi | E5M00_RS04390 | Not Available | + | 885116 - 885487 | 13633.4 |
| type ii secretion system minor pseudopilin gspj | E5M00_RS04395 | Not Available | + | 885484 - 886089 | 22270.2 |
| type ii secretion system minor pseudopilin gspk | E5M00_RS04400 | Not Available | + | 886086 - 887063 | 36560.4 |
| type ii secretion system protein gspl | E5M00_RS04405 | Not Available | + | 887060 - 888238 | 44187.3 |
| gspm family type ii secretion system protein yghd | E5M00_RS04410 | Not Available | + | 888240 - 888776 | 20292.6 |
| dknyy family protein | E5M00_RS27855 | Not Available | + | 889337 - 889478 | 5650.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism