Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcf | E5M00_RS04315 | Not Available | + | 865194 - 866417 | 45111.7 |
| glcg family protein | E5M00_RS04320 | Not Available | + | 866422 - 866826 | 13737.5 |
| malate synthase g | E5M00_RS04325 | Not Available | + | 866848 - 869019 | 80640.4 |
| glycolate permease glca | E5M00_RS04330 | Not Available | + | 869374 - 871056 | 58909.6 |
| is1-like element is1b family transposase | E5M00_RS04335 | Not Available | + | 871655 - 872352 | 26586.4 |
| lipoprotein metalloprotease ssle | E5M00_RS04340 | Not Available | + | 872362 - 876882 | 166275.0 |
| prepilin peptidase pppa | E5M00_RS04350 | Not Available | + | 877012 - 877821 | 29466.8 |
| type ii secretion system pilot lipoprotein gsps-beta | E5M00_RS04355 | Not Available | + | 877887 - 878297 | 14670.8 |
| type ii secretion system protein gspc | E5M00_RS04360 | Not Available | + | 878315 - 879274 | 35692.3 |
| type ii secretion system secretin gspd | E5M00_RS04365 | Not Available | + | 879304 - 881364 | 74210.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism