Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | E5M00_RS04165 | Not Available | - | 834504 - 835544 | 38872.4 |
| yghx family hydrolase | E5M00_RS04170 | Not Available | + | 835700 - 836587 | 32572.6 |
| duf2623 family protein yghw | E5M00_RS04175 | Not Available | + | 836706 - 836993 | 10946.1 |
| hydrogenase 2 small subunit | E5M00_RS04180 | Not Available | + | 837182 - 838300 | 39654.3 |
| hydrogenase 2 operon protein hyba | E5M00_RS04185 | Not Available | + | 838303 - 839289 | 35961.0 |
| ni/fe-hydrogenase cytochrome b subunit | E5M00_RS04190 | Not Available | + | 839279 - 840457 | 43604.6 |
| hydrogenase 2 large subunit | E5M00_RS04195 | Not Available | + | 840454 - 842157 | 62494.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | E5M00_RS04200 | Not Available | + | 842157 - 842651 | 17751.8 |
| hydrogenase-2 assembly chaperone | E5M00_RS04205 | Not Available | + | 842644 - 843132 | 17980.7 |
| hydrogenase maturation nickel metallochaperone hypa | E5M00_RS04210 | Not Available | + | 843125 - 843466 | 12698.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism