Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. PF9285
Accession NumberNZ_CP038791.1
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dknyy family protein | E5M00_RS03970 | Not Available | - | 796159 - 797649 | 55978.4 |
| fimbrial-like protein | E5M00_RS03975 | Not Available | - | 797709 - 798260 | 19495.1 |
| ubiquinone biosynthesis accessory factor ubik | E5M00_RS03980 | Not Available | - | 798544 - 798834 | 11276.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | E5M00_RS03985 | Not Available | + | 799208 - 799861 | 23354.9 |
| protein yqid | E5M00_RS27500 | Not Available | + | 800123 - 800293 | 6810.31 |
| zinc transporter zupt | E5M00_RS03990 | Not Available | - | 800351 - 801124 | 26486.5 |
| 4,5-dopa dioxygenase extradiol | E5M00_RS03995 | Not Available | + | 801267 - 802055 | 28893.7 |
| glutathionylspermidine synthase family protein | E5M00_RS04000 | Not Available | - | 802093 - 803253 | 45044.4 |
| duf1190 family protein | E5M00_RS04005 | Not Available | - | 803259 - 803930 | 23480.7 |
| outer membrane channel protein tolc | E5M00_RS04010 | Not Available | - | 804078 - 805559 | 53743.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism