Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit theta | E1729_03230 | Not Available | - | 675502 - 675732 | 8846.79 |
| copc domain-containing protein yoba | E1729_03235 | Not Available | + | 675871 - 676245 | 13410.9 |
| copper homeostasis membrane protein copd | E1729_03240 | Not Available | + | 676249 - 677121 | 32461.2 |
| duf2511 domain-containing protein | E1729_03245 | Not Available | + | 677134 - 677475 | 12393.2 |
| protein-serine/threonine phosphatase | E1729_03250 | Not Available | + | 677870 - 678526 | 25326.4 |
| duf1482 family protein | E1729_03255 | Not Available | - | 678527 - 678718 | 7324.62 |
| duf1480 family protein | E1729_03260 | Not Available | - | 678823 - 679059 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | E1729_03265 | Not Available | - | 679176 - 680615 | 53235.4 |
| pqib family protein | E1729_03270 | Not Available | - | 680695 - 683328 | 94879.9 |
| paraquat-inducible protein a | E1729_03275 | Not Available | - | 683297 - 684580 | 48217.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism