Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | E1729_03130 | Not Available | + | 653359 - 653970 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | E1729_03135 | Not Available | + | 653979 - 654989 | 37166.0 |
| is3-like element is1397 family transposase | E1729_03140 | Not Available | + | 655099 - 656447 | 51896.5 |
| zinc abc transporter permease subunit znub | E1729_03145 | Not Available | - | 656641 - 657426 | 27778.5 |
| zinc abc transporter atp-binding protein znuc | E1729_03150 | Not Available | - | 657423 - 658178 | 27869.3 |
| zinc abc transporter substrate-binding protein znua | E1729_03155 | Not Available | + | 658257 - 659189 | 33935.4 |
| murein dd-endopeptidase mepm | E1729_03160 | Not Available | + | 659205 - 660527 | 49060.6 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | E1729_03165 | Not Available | + | 660646 - 661617 | 37440.6 |
| pyruvate kinase | E1729_03170 | Not Available | - | 661749 - 663191 | 51374.3 |
| murr/rpir family transcriptional regulator | E1729_03175 | Not Available | - | 663319 - 664188 | 31989.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism