Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna pseudouridine(516) synthase rsua | E1729_01860 | Not Available | + | 416240 - 416935 | 25866.8 |
| multidrug efflux mfs transporter bcr | E1729_01865 | Not Available | + | 416963 - 418153 | 43369.4 |
| hypothetical protein | E1729_01870 | Not Available | + | 418487 - 418831 | 12525.9 |
| microcin c abc transporter atp-binding protein yejf | E1729_01875 | Not Available | - | 418835 - 420424 | 58656.7 |
| abc transporter permease | E1729_01880 | Not Available | - | 420426 - 421451 | 38108.7 |
| abc transporter permease | E1729_01885 | Not Available | - | 421451 - 422545 | 40362.6 |
| abc transporter substrate-binding protein | E1729_01890 | Not Available | - | 422546 - 424360 | 69783.7 |
| cyclic di-gmp phosphodiesterase | E1729_01895 | Not Available | - | 424442 - 425998 | 58589.6 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | E1729_01900 | Not Available | - | 426179 - 426745 | 21041.1 |
| kdo(2)-lipid a phosphotransferase | E1729_01905 | Not Available | - | 427157 - 427870 | 26773.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism