Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | E1729_01260 | Not Available | + | 277617 - 278399 | 27973.1 |
| histidine abc transporter substrate-binding protein hisj | E1729_01265 | Not Available | + | 278620 - 279402 | 28484.9 |
| histidine abc transporter permease hisq | E1729_01270 | Not Available | + | 279492 - 280178 | 24664.9 |
| histidine abc transporter permease | E1729_01275 | Not Available | + | 280175 - 280891 | 26871.3 |
| histidine abc transporter atp-binding protein hisp | E1729_01280 | Not Available | + | 280899 - 281672 | 28612.7 |
| tigr01777 family protein | E1729_01285 | Not Available | - | 281831 - 282724 | 32752.7 |
| dihydroneopterin triphosphate 2'-epimerase | E1729_01290 | Not Available | - | 282745 - 283107 | 14112.9 |
| gsh-dependent disulfide bond oxidoreductase | E1729_01295 | Not Available | - | 283164 - 283811 | 24524.2 |
| glutathione transferase | E1729_01300 | Not Available | + | 283947 - 284591 | 24298.9 |
| phosphodiesterase | E1729_01305 | Not Available | + | 284647 - 285198 | 19992.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism