Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-serine ammonia-lyase | E1729_01005 | Not Available | - | 225607 - 226935 | 47903.3 |
| d-serine transporter dsdx | E1729_01010 | Not Available | - | 226953 - 228290 | 47154.1 |
| dna-binding transcriptional regulator dsdc | E1729_01015 | Not Available | + | 228508 - 229443 | 35373.1 |
| alpa family transcriptional regulator | E1729_01025 | Not Available | + | 230003 - 230230 | 8789.66 |
| hypothetical protein | E1729_01030 | Not Available | + | 230248 - 231108 | 32589.8 |
| major capsid protein | E1729_01035 | Not Available | + | 231131 - 232135 | 37342.9 |
| host cell division inhibitor icd-like protein | E1729_01040 | Not Available | + | 232223 - 232813 | 21930.1 |
| hypothetical protein | E1729_01045 | Not Available | + | 232810 - 233046 | 8198.93 |
| hypothetical protein | E1729_01050 | Not Available | + | 233039 - 233449 | 15528.8 |
| duf927 domain-containing protein | E1729_01055 | Not Available | + | 233446 - 236133 | 97945.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism