Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | E1729_00905 | Not Available | + | 199508 - 200593 | 39617.4 |
| aminopeptidase | E1729_00910 | Not Available | + | 200593 - 201630 | 37445.1 |
| phosphoenolpyruvate--protein phosphotransferase | E1729_00915 | Not Available | + | 201655 - 204150 | 92042.3 |
| arac family transcriptional regulator | E1729_00920 | Not Available | - | 204153 - 205010 | 32444.6 |
| response regulator transcription factor | E1729_00925 | Not Available | - | 205023 - 205757 | 28669.6 |
| sensor histidine kinase | E1729_00930 | Not Available | - | 205772 - 207469 | 62679.3 |
| alanine transaminase | E1729_00935 | Not Available | + | 207846 - 209084 | 46218.8 |
| membrane protein ypdk | E1729_00940 | Not Available | - | 209149 - 209220 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | E1729_00945 | Not Available | - | 209577 - 210497 | 35571.6 |
| duf2545 family protein | E1729_00950 | Not Available | + | 210850 - 211092 | 8969.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism