Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hokd | E1729_25520 | Not Available | + | 5113945 - 5114100 | 5737.24 |
| hypothetical protein | E1729_25525 | Not Available | - | 5114142 - 5114321 | 6548.11 |
| hypothetical protein | E1729_25530 | Not Available | + | 5114268 - 5114540 | 11172.2 |
| duf968 domain-containing protein | E1729_25535 | Not Available | + | 5114542 - 5115600 | 39567.0 |
| rusa family crossover junction endodeoxyribonuclease | E1729_25540 | Not Available | + | 5115601 - 5115963 | 13881.0 |
| antitermination protein | E1729_25545 | Not Available | + | 5115978 - 5116799 | 30588.8 |
| plasmid replication protein | E1729_25550 | Not Available | + | 5116927 - 5117841 | 34647.3 |
| hypothetical protein | E1729_25555 | Not Available | - | 5118045 - 5118443 | 15333.6 |
| mobilization protein | E1729_25560 | Not Available | + | 5118620 - 5119546 | 36370.5 |
| hypothetical protein | E1729_25565 | Not Available | + | 5119549 - 5120082 | 19826.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism