Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| epoxyqueuosine reductase queh | E1729_25265 | Not Available | + | 5076112 - 5076777 | 25866.8 |
| type i toxin-antitoxin system hok family toxin | E1729_25270 | Not Available | + | 5076958 - 5077170 | 7808.85 |
| hypothetical protein | E1729_25275 | Not Available | - | 5077212 - 5077391 | 6534.04 |
| hypothetical protein | E1729_25280 | Not Available | + | 5077338 - 5077610 | 11157.2 |
| duf968 domain-containing protein | E1729_25285 | Not Available | + | 5077612 - 5078667 | 39615.9 |
| rusa family crossover junction endodeoxyribonuclease | E1729_25290 | Not Available | + | 5078668 - 5079048 | 14557.8 |
| antitermination protein | E1729_25295 | Not Available | + | 5079045 - 5079866 | 30646.1 |
| trmb family transcriptional regulator | E1729_25300 | Not Available | + | 5080093 - 5080290 | 7412.96 |
| site-specific dna-methyltransferase | E1729_25305 | Not Available | + | 5080442 - 5081491 | 39849.6 |
| type vi secretion system baseplate subunit tssf | E1729_25310 | Not Available | - | 5081525 - 5082956 | 54756.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism