Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiazole biosynthesis adenylyltransferase thif | E1729_23470 | Not Available | - | 4770326 - 4771081 | 27107.7 |
| thiamine phosphate synthase | E1729_23475 | Not Available | - | 4771074 - 4771709 | 23028.7 |
| phosphomethylpyrimidine synthase thic | E1729_23480 | Not Available | - | 4771709 - 4773604 | 70797.4 |
| sigma d regulator | E1729_23485 | Not Available | - | 4773837 - 4774313 | 18221.8 |
| nad(+) diphosphatase | E1729_23490 | Not Available | + | 4774408 - 4775181 | 29704.6 |
| uroporphyrinogen decarboxylase | E1729_23495 | Not Available | + | 4775221 - 4776285 | 39236.4 |
| deoxyribonuclease v | E1729_23500 | Not Available | + | 4776295 - 4776966 | 24732.0 |
| duf416 family protein | E1729_23505 | Not Available | + | 4777009 - 4777599 | 22523.8 |
| dna-binding protein hu-alpha | E1729_23510 | Not Available | + | 4777786 - 4778058 | 9535.51 |
| duf1481 domain-containing protein | E1729_23515 | Not Available | + | 4778071 - 4778766 | 26308.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism