Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | E1729_22830 | Not Available | + | 4643010 - 4644206 | 44398.0 |
| type ii secretion system protein gspg | E1729_22835 | Not Available | + | 4644216 - 4644653 | 15925.1 |
| type ii secretion system protein gsph | E1729_22840 | Not Available | + | 4644661 - 4645170 | 18485.0 |
| type ii secretion system protein gspi | E1729_22845 | Not Available | + | 4645167 - 4645544 | 13946.3 |
| type ii secretion system protein gspj | E1729_22850 | Not Available | + | 4645537 - 4646124 | 22246.6 |
| general secretion pathway protein gspk | E1729_22855 | Not Available | + | 4646117 - 4647100 | 37468.5 |
| type ii secretion system protein gspl | E1729_22860 | Not Available | + | 4647115 - 4648278 | 44476.1 |
| type ii secretion system protein m | E1729_22865 | Not Available | + | 4648275 - 4648736 | 17313.9 |
| bacterioferritin | E1729_22875 | Not Available | - | 4649437 - 4649913 | 18496.2 |
| bacterioferritin-associated ferredoxin | E1729_22880 | Not Available | - | 4649985 - 4650179 | 7363.04 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism