Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | E1729_22780 | Not Available | - | 4633736 - 4634557 | 29862.3 |
| 50s ribosomal protein l23 | E1729_22785 | Not Available | - | 4634575 - 4634877 | 11199.8 |
| 50s ribosomal protein l4 | E1729_22790 | Not Available | - | 4634874 - 4635479 | 22087.8 |
| 50s ribosomal protein l3 | E1729_22795 | Not Available | - | 4635490 - 4636119 | 22244.8 |
| 30s ribosomal protein s10 | E1729_22800 | Not Available | - | 4636152 - 4636463 | 11736.3 |
| putative general secretion pathway protein gspb | E1729_22805 | Not Available | - | 4636701 - 4637120 | 15806.7 |
| type ii secretion system protein gspa | E1729_22810 | Not Available | - | 4637122 - 4638591 | 55276.1 |
| type ii secretion system protein gspc | E1729_22815 | Not Available | + | 4638771 - 4639586 | 30085.8 |
| type ii secretion system protein gspd | E1729_22820 | Not Available | + | 4639570 - 4641522 | 70732.3 |
| type ii secretion system protein gspe | E1729_22825 | Not Available | + | 4641532 - 4643013 | 54680.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism