Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucan biosynthesis protein d | E1729_21605 | Not Available | - | 4398935 - 4400590 | 62798.3 |
| voc family protein | E1729_21610 | Not Available | - | 4400815 - 4402158 | 50972.7 |
| lysr family transcriptional regulator | E1729_21615 | Not Available | + | 4402375 - 4403298 | 33388.5 |
| type i toxin-antitoxin system toxin hokb | E1729_21625 | Not Available | + | 4404042 - 4404191 | 5626.16 |
| hypothetical protein | E1729_21630 | Not Available | - | 4404263 - 4404436 | 5812.15 |
| cytochrome b561 | E1729_21635 | Not Available | - | 4404681 - 4405211 | 20243.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | E1729_21640 | Not Available | + | 4405400 - 4406401 | 35779.7 |
| aldehyde dehydrogenase | E1729_21645 | Not Available | - | 4406443 - 4407882 | 52298.8 |
| ydcf family protein | E1729_21650 | Not Available | - | 4408092 - 4408892 | 29649.3 |
| atp-dependent rna helicase hrpa | E1729_21655 | Not Available | - | 4409165 - 4413067 | 149019.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism