Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| addiction module antidote protein, higa family | E1729_21395 | Not Available | + | 4356170 - 4356454 | 10401.7 |
| formate dehydrogenase cytochrome b556 subunit | E1729_21400 | Not Available | - | 4356504 - 4357157 | 25351.9 |
| formate dehydrogenase subunit beta | E1729_21405 | Not Available | - | 4357150 - 4358034 | 32173.4 |
| formate dehydrogenase-n subunit alpha | E1729_21410 | Not Available | - | 4358047 - 4361094 | 112722.0 |
| aromatic amino acid dmt transporter yddg | E1729_21415 | Not Available | + | 4361326 - 4362207 | 31574.4 |
| nark family nitrate/nitrite mfs transporter | E1729_21420 | Not Available | + | 4362480 - 4363868 | 49912.1 |
| nitrate reductase subunit alpha | E1729_21425 | Not Available | + | 4363963 - 4367703 | 140225.0 |
| nitrate reductase subunit beta | E1729_21430 | Not Available | + | 4367700 - 4369244 | 58520.0 |
| nitrate reductase molybdenum cofactor assembly chaperone | E1729_21435 | Not Available | + | 4369244 - 4369939 | 26190.2 |
| respiratory nitrate reductase subunit gamma | E1729_21440 | Not Available | + | 4369936 - 4370616 | 25713.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism