Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1729_21335 | Not Available | - | 4344278 - 4344766 | 18036.5 |
| toxin | E1729_21340 | Not Available | - | 4344763 - 4345140 | 14222.0 |
| acid resistance gamma-aminobutyrate antiporter gadc | E1729_21345 | Not Available | + | 4345342 - 4346877 | 55094.0 |
| glycoside hydrolase family 10 protein | E1729_21350 | Not Available | + | 4347008 - 4348327 | 49620.8 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | E1729_21360 | Not Available | + | 4348893 - 4351292 | 90216.6 |
| peroxiredoxin osmc | E1729_21365 | Not Available | - | 4351482 - 4351913 | 15089.0 |
| biofilm-dependent modulation protein | E1729_21370 | Not Available | + | 4352256 - 4352471 | 7988.24 |
| stationary-phase-induced ribosome-associated protein | E1729_21375 | Not Available | + | 4352573 - 4352710 | 5096.13 |
| nad-dependent malic enzyme | E1729_21380 | Not Available | + | 4352866 - 4354563 | 63176.0 |
| alcohol dehydrogenase adhp | E1729_21385 | Not Available | + | 4354697 - 4355707 | 35398.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism