Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | E1729_21285 | Not Available | - | 4337491 - 4337814 | 11708.3 |
| type ii toxin-antitoxin system rele/pare family toxin | E1729_21290 | Not Available | - | 4337798 - 4338151 | 13512.3 |
| hypothetical protein | E1729_21295 | Not Available | + | 4338110 - 4338301 | 7398.28 |
| purine ribonucleoside efflux pump nepi | E1729_21300 | Not Available | + | 4338385 - 4339575 | 41878.5 |
| hypothetical protein | E1729_21305 | Not Available | - | 4339616 - 4339909 | 11048.4 |
| lipoprotein nlpa | E1729_21310 | Not Available | + | 4340131 - 4340949 | 29416.2 |
| dmt family transporter | E1729_21315 | Not Available | - | 4340953 - 4341876 | 33129.5 |
| hypothetical protein | E1729_21320 | Not Available | - | 4342054 - 4342551 | 18585.0 |
| duf4942 domain-containing protein | E1729_21325 | Not Available | - | 4343144 - 4343989 | 32747.1 |
| duf957 domain-containing protein | E1729_21330 | Not Available | - | 4344045 - 4344266 | 7884.09 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism