Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | E1729_21075 | Not Available | - | 4294341 - 4295705 | 49199.8 |
| membrane protein insertase yidc | E1729_21080 | Not Available | - | 4295811 - 4297457 | 61543.5 |
| membrane protein insertion efficiency factor yidd | E1729_21085 | Not Available | - | 4297460 - 4297717 | 9381.61 |
| ribonuclease p protein component | E1729_21090 | Not Available | - | 4297681 - 4298040 | 13790.0 |
| 50s ribosomal protein l34 | E1729_21095 | Not Available | - | 4298057 - 4298197 | 5380.74 |
| hypothetical protein | E1729_21100 | Not Available | - | 4298427 - 4298507 | 3144.82 |
| chromosomal replication initiator protein dnaa | E1729_21105 | Not Available | + | 4298804 - 4300207 | 52553.7 |
| dna polymerase iii subunit beta | E1729_21110 | Not Available | + | 4300212 - 4301312 | 40589.1 |
| dna replication/repair protein recf | E1729_21115 | Not Available | + | 4301312 - 4302385 | 40516.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | E1729_21120 | Not Available | + | 4302414 - 4304828 | 89985.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism