Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | E1729_20665 | Not Available | - | 4207433 - 4208092 | 24182.9 |
| type i toxin-antitoxin system ibs family toxin | E1729_20670 | Not Available | - | 4208310 - 4208366 | 2079.86 |
| type i toxin-antitoxin system ibs family toxin | E1729_20675 | Not Available | - | 4208638 - 4208694 | 2136.9 |
| multidrug efflux rnd transporter subunit mdta | E1729_20680 | Not Available | + | 4208973 - 4210220 | 44392.7 |
| multidrug efflux rnd transporter permease subunit mdtb | E1729_20685 | Not Available | + | 4210220 - 4213342 | 112088.0 |
| multidrug efflux rnd transporter permease subunit mdtc | E1729_20690 | Not Available | + | 4213343 - 4216420 | 110963.0 |
| mfs transporter | E1729_20695 | Not Available | + | 4216421 - 4217836 | 50838.1 |
| two-component system sensor histidine kinase baes | E1729_20700 | Not Available | + | 4217833 - 4219236 | 52115.5 |
| two-component system response regulator baer | E1729_20705 | Not Available | + | 4219233 - 4219955 | 27657.5 |
| duf1508 domain-containing protein | E1729_20710 | Not Available | + | 4220135 - 4220467 | 11994.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism