Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | E1729_20240 | Not Available | + | 4123041 - 4124534 | 55606.8 |
| nad(p)h-flavin reductase | E1729_20245 | Not Available | + | 4124580 - 4125281 | 26243.5 |
| acetyl-coa c-acyltransferase fada | E1729_20250 | Not Available | - | 4125462 - 4126625 | 40825.6 |
| fatty acid oxidation complex subunit alpha fadb | E1729_20255 | Not Available | - | 4126635 - 4128824 | 79625.6 |
| xaa-pro dipeptidase | E1729_20260 | Not Available | + | 4129014 - 4130345 | 50178.9 |
| impact family protein | E1729_20265 | Not Available | + | 4130345 - 4130959 | 21690.0 |
| trk system potassium transporter trkh | E1729_20270 | Not Available | + | 4130998 - 4132449 | 52948.8 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | E1729_20275 | Not Available | + | 4132461 - 4133006 | 21227.4 |
| duf987 domain-containing protein | E1729_20280 | Not Available | + | 4133124 - 4133345 | 8409.23 |
| antitoxin of toxin-antitoxin stability system | E1729_20285 | Not Available | + | 4133364 - 4134008 | 24956.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism