Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase fdra | E1729_20140 | Not Available | - | 4104415 - 4105974 | 54932.9 |
| duf2877 domain-containing protein | E1729_20145 | Not Available | - | 4106069 - 4106929 | 31925.3 |
| cysteine hydrolase | E1729_20150 | Not Available | - | 4106935 - 4107603 | 24079.1 |
| dienelactone hydrolase family protein | E1729_20155 | Not Available | - | 4107860 - 4108669 | 29326.6 |
| uridine phosphorylase | E1729_20160 | Not Available | + | 4108931 - 4109695 | 27288.8 |
| c4-dicarboxylate abc transporter permease | E1729_20165 | Not Available | - | 4109730 - 4111220 | 51795.2 |
| tripartite tricarboxylate transporter tctb family protein | E1729_20170 | Not Available | - | 4111233 - 4111739 | 18051.8 |
| tripartite tricarboxylate transporter substrate binding protein | E1729_20175 | Not Available | - | 4111756 - 4112730 | 34173.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | E1729_20180 | Not Available | - | 4112755 - 4113384 | 22292.3 |
| 2-dehydro-3-deoxygalactonokinase | E1729_20185 | Not Available | - | 4113374 - 4114378 | 36412.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism