Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioesterase family protein | E1729_20040 | Not Available | - | 4081885 - 4082352 | 17163.8 |
| phospholipase a | E1729_20045 | Not Available | + | 4082517 - 4083386 | 33108.7 |
| atp-dependent dna helicase recq | E1729_20050 | Not Available | + | 4083511 - 4085340 | 68298.5 |
| threonine export protein rhtc | E1729_20055 | Not Available | + | 4085405 - 4086025 | 22508.5 |
| rpn family recombination-promoting nuclease/putative transposase | E1729_20060 | Not Available | - | 4086063 - 4086923 | 33025.1 |
| homoserine/homoserine lactone efflux protein | E1729_20065 | Not Available | - | 4087082 - 4087702 | 22428.2 |
| lysophospholipase l2 | E1729_20070 | Not Available | + | 4087813 - 4088835 | 38954.4 |
| sugar/pyridoxal phosphate phosphatase yigl | E1729_20075 | Not Available | + | 4088843 - 4089643 | 29709.4 |
| biotin transporter | E1729_20080 | Not Available | + | 4089719 - 4090618 | 33756.0 |
| hth-type transcriptional regulator metr | E1729_20085 | Not Available | - | 4090506 - 4091459 | 35645.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism