Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | E1729_19625 | Not Available | + | 4000111 - 4001139 | 37749.3 |
| dha2 family efflux mfs transporter permease subunit | E1729_19630 | Not Available | + | 4001139 - 4002650 | 55450.6 |
| dna endonuclease smra | E1729_19635 | Not Available | + | 4002845 - 4003408 | 21573.8 |
| diguanylate cyclase dgcm | E1729_19640 | Not Available | - | 4003429 - 4004661 | 46557.9 |
| zinc transporter zntb | E1729_19645 | Not Available | + | 4004916 - 4005899 | 36614.3 |
| hypothetical protein | E1729_19650 | Not Available | - | 4006188 - 4006418 | 7515.82 |
| atp-dependent rna helicase dbpa | E1729_19655 | Not Available | + | 4006377 - 4007750 | 49158.7 |
| trna 2-thiocytidine(32) synthetase ttca | E1729_19660 | Not Available | - | 4007878 - 4008813 | 35489.9 |
| integrase | E1729_19665 | Not Available | - | 4008865 - 4009116 | 9680.6 |
| hypothetical protein | E1729_19675 | Not Available | + | 4009882 - 4010061 | 6771.76 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism