Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein sapd | E1729_19415 | Not Available | - | 3960494 - 3961486 | 37662.9 |
| peptide abc transporter permease sapc | E1729_19420 | Not Available | - | 3961486 - 3962376 | 31550.0 |
| peptide abc transporter permease sapb | E1729_19425 | Not Available | - | 3962363 - 3963328 | 36008.1 |
| peptide abc transporter substrate-binding protein sapa | E1729_19430 | Not Available | - | 3963325 - 3964968 | 61469.0 |
| duf2543 family protein | E1729_19435 | Not Available | - | 3965281 - 3965526 | 9323.77 |
| phage shock protein operon transcriptional activator | E1729_19445 | Not Available | - | 3965951 - 3966928 | 36947.5 |
| phage shock protein pspa | E1729_19450 | Not Available | + | 3967095 - 3967763 | 25536.5 |
| envelope stress response membrane protein pspb | E1729_19455 | Not Available | + | 3967817 - 3968041 | 8763.59 |
| envelope stress response membrane protein pspc | E1729_19460 | Not Available | + | 3968041 - 3968400 | 13517.7 |
| phage shock protein pspd | E1729_19465 | Not Available | + | 3968409 - 3968630 | 8042.22 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism