Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | E1729_19205 | Not Available | - | 3915534 - 3916340 | 28782.8 |
| tryptophan synthase subunit beta | E1729_19210 | Not Available | - | 3916340 - 3917533 | 43000.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | E1729_19215 | Not Available | - | 3917545 - 3918903 | 49374.9 |
| bifunctional anthranilate synthase glutamate amidotransferase component trpg/anthranilate phosphoribosyltransferase trpd | E1729_19220 | Not Available | - | 3918907 - 3920502 | 56950.5 |
| anthranilate synthase component i | E1729_19225 | Not Available | - | 3920502 - 3922064 | 57480.7 |
| trp operon leader peptide | E1729_19230 | Not Available | - | 3922156 - 3922200 | 1723.19 |
| 5'-3' exoribonuclease | E1729_19235 | Not Available | + | 3922338 - 3923219 | 32599.8 |
| threonylcarbamoyl-amp synthase | E1729_19240 | Not Available | + | 3923216 - 3923836 | 23213.2 |
| duf2207 domain-containing protein | E1729_19245 | Not Available | + | 3923864 - 3925759 | 71212.3 |
| 23s rrna pseudouridine(2605) synthase rlub | E1729_19250 | Not Available | + | 3925972 - 3926847 | 32727.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism