Escherichia coli str. NUBRI-E

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NUBRI-E is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. E. coli NUBRI-E has an optimal growth temperature of 37.0 °C, which aligns with the physiological temperature of many mammalian hosts, suggesting a potential adaptation for survival within host-associated habitats. The ability of E. coli NUBRI-E to inhabit host-associated environments reflects its versatile metabolic capabilities, allowing it to utilize various substrates for energy production. This adaptability may enhance its survival in diverse ecological niches, particularly within the gastrointestinal tracts of warm-blooded animals. The facultative anaerobic nature of this strain further implies that it can efficiently switch between aerobic respiration and fermentation, providing a competitive advantage in fluctuating oxygen conditions commonly found in host environments. Understanding the traits of E. coli NUBRI-E can offer insights into its role in microbial communities associated with hosts, where it may contribute to essential processes such as nutrient cycling and maintaining gut homeostasis. The strain's metabolic flexibility and optimal growth temperature suggest a sophisticated adaptation to host-associated life, highlighting the intricate relationships between microbial inhabitants and their hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. NUBRI-E
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. NUBRI-E


Gene Summary

Adenine Count

1290282 bp

Thymine Count

1291497 bp

Guanine Count

1342139 bp

Cytosine Count

1315095 bp

Genome Length

5239013 bp

Protein-coding Genes

4761 genes

Non-Coding Genes

392 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lysine-n-methylaseE1729_18755Not Available-3834546 - 383547835437.8
flagellar protein flgnE1729_18760Not Available-3835606 - 383603416606.0
flagellar biosynthesis anti-sigma factor flgmE1729_18765Not Available-3836047 - 38363259736.27
flagellar basal body p-ring formation protein flgaE1729_18770Not Available-3836407 - 383714426897.6
flagellar basal body rod protein flgbE1729_18775Not Available+3837226 - 383756112429.7
flagellar basal body rod protein flgcE1729_18780Not Available+3837564 - 383799515367.0
flagellar hook capping proteinE1729_18785Not Available+3837995 - 383870824688.2
flagellar basal body protein flaeE1729_18790Not Available+3838980 - 384018241793.5
flagellar basal body rod protein flgfE1729_18795Not Available+3840182 - 384091925899.3
flagellar basal-body rod protein flggE1729_18800Not Available+3840998 - 384178327507.3

Displaying genes 3841 – 3850 of 5153 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites