Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | E1729_05940 | Not Available | - | 1220354 - 1220884 | 19965.1 |
| atp-dependent helicase hrpb | E1729_05945 | Not Available | + | 1220958 - 1223387 | 89289.3 |
| bifunctional glycosyl transferase/transpeptidase | E1729_05950 | Not Available | + | 1223481 - 1226006 | 93907.6 |
| type 1 fimbrial protein | E1729_05955 | Not Available | + | 1226347 - 1226913 | 19423.5 |
| molecular chaperone | E1729_05960 | Not Available | + | 1226959 - 1227675 | 26623.2 |
| fimbrial biogenesis outer membrane usher protein | E1729_05965 | Not Available | + | 1227742 - 1230219 | 91407.3 |
| type 1 fimbrial protein | E1729_05970 | Not Available | + | 1230241 - 1231251 | 36141.9 |
| ferrichrome porin fhua | E1729_05975 | Not Available | + | 1231471 - 1233720 | 82471.8 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | E1729_05980 | Not Available | + | 1233772 - 1234569 | 28900.3 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | E1729_05985 | Not Available | + | 1234569 - 1235459 | 33051.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism