Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacteriocin immunity protein | E1729_05740 | Not Available | + | 1178874 - 1179164 | 11482.5 |
| hnh endonuclease | E1729_05745 | Not Available | + | 1179331 - 1179519 | 7026.31 |
| bacteriocin immunity protein | E1729_05750 | Not Available | + | 1179573 - 1179863 | 11408.7 |
| hypothetical protein | E1729_05755 | Not Available | + | 1180031 - 1180270 | 9087.06 |
| bacteriocin immunity protein | E1729_05760 | Not Available | + | 1180271 - 1180561 | 11453.4 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | E1729_05765 | Not Available | + | 1181017 - 1181781 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | E1729_05770 | Not Available | + | 1181942 - 1184605 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | E1729_05775 | Not Available | + | 1184620 - 1186512 | 66089.7 |
| dihydrolipoyl dehydrogenase | E1729_05780 | Not Available | + | 1186720 - 1188144 | 50691.4 |
| duf3300 domain-containing protein | E1729_05785 | Not Available | - | 1188215 - 1189978 | 65767.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism