Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | E1729_05485 | Not Available | - | 1127198 - 1128808 | 59474.6 |
| thiamine abc transporter substrate binding subunit | E1729_05490 | Not Available | - | 1128784 - 1129767 | 36223.3 |
| hth-type transcriptional regulator sgrr | E1729_05495 | Not Available | - | 1129931 - 1131586 | 64123.9 |
| glucose uptake inhibitor sgrt | E1729_05500 | Not Available | + | 1131675 - 1131806 | 5382.47 |
| 3-isopropylmalate dehydratase small subunit | E1729_05505 | Not Available | - | 1131913 - 1132518 | 22604.8 |
| 3-isopropylmalate dehydratase large subunit | E1729_05510 | Not Available | - | 1132529 - 1133929 | 49884.7 |
| 3-isopropylmalate dehydrogenase | E1729_05515 | Not Available | - | 1133932 - 1135023 | 39503.2 |
| 2-isopropylmalate synthase | E1729_05520 | Not Available | - | 1135023 - 1136594 | 57345.2 |
| leu operon leader peptide | E1729_05525 | Not Available | - | 1136686 - 1136772 | 3146.0 |
| transcriptional regulator leuo | E1729_05530 | Not Available | + | 1137412 - 1138356 | 35672.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism