Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | E1729_05435 | Not Available | - | 1115661 - 1117163 | 56106.2 |
| ribulokinase | E1729_05440 | Not Available | - | 1117174 - 1118874 | 61265.8 |
| arabinose operon transcriptional regulator arac | E1729_05445 | Not Available | + | 1119213 - 1120058 | 32183.3 |
| deor family transcriptional regulator | E1729_05450 | Not Available | + | 1120282 - 1121514 | 44474.1 |
| dihydrodipicolinate synthase family protein | E1729_05455 | Not Available | + | 1121540 - 1122463 | 34686.7 |
| tripartite tricarboxylate transporter substrate binding protein | E1729_05460 | Not Available | + | 1122518 - 1123471 | 33606.7 |
| tripartite tricarboxylate transporter tctb family protein | E1729_05465 | Not Available | + | 1123520 - 1123957 | 16283.2 |
| c4-dicarboxylate abc transporter permease | E1729_05470 | Not Available | + | 1123967 - 1125454 | 52578.8 |
| deda family protein | E1729_05475 | Not Available | + | 1125638 - 1126402 | 28207.8 |
| thiamine abc transporter atp-binding protein thiq | E1729_05480 | Not Available | - | 1126516 - 1127214 | 25031.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism