Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co2+/mg2+ efflux protein apag | E1729_05385 | Not Available | - | 1101583 - 1101960 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | E1729_05390 | Not Available | - | 1101963 - 1102784 | 30291.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | E1729_05395 | Not Available | - | 1102781 - 1103770 | 35251.1 |
| peptidylprolyl isomerase sura | E1729_05400 | Not Available | - | 1103770 - 1105056 | 47286.5 |
| lps assembly protein lptd | E1729_05405 | Not Available | - | 1105109 - 1107463 | 89657.9 |
| co-chaperone djla | E1729_05410 | Not Available | + | 1107718 - 1108533 | 30597.2 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | E1729_05415 | Not Available | - | 1108683 - 1109342 | 24848.0 |
| rna polymerase-associated protein rapa | E1729_05420 | Not Available | - | 1109354 - 1112260 | 109776.0 |
| dna polymerase ii | E1729_05425 | Not Available | - | 1112425 - 1114776 | 90128.8 |
| l-ribulose-5-phosphate 4-epimerase | E1729_05430 | Not Available | - | 1114851 - 1115546 | 25458.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism