Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase small subunit | E1729_05285 | Not Available | + | 1079410 - 1080558 | 41417.4 |
| carbamoyl-phosphate synthase large subunit | E1729_05290 | Not Available | + | 1080576 - 1083797 | 117907.0 |
| carnitine metabolism transcriptional regulator caif | E1729_05295 | Not Available | + | 1084058 - 1084453 | 15423.0 |
| carnitine operon protein caie | E1729_05300 | Not Available | - | 1084572 - 1085162 | 21161.6 |
| carnitinyl-coa dehydratase | E1729_05305 | Not Available | - | 1085168 - 1085953 | 28177.8 |
| crotonobetaine/carnitine-coa ligase | E1729_05310 | Not Available | - | 1086062 - 1087615 | 58668.6 |
| l-carnitine coa-transferase | E1729_05315 | Not Available | - | 1087688 - 1088905 | 45075.2 |
| crotonobetainyl-coa dehydrogenase | E1729_05320 | Not Available | - | 1089034 - 1090176 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiport bcct transporter | E1729_05325 | Not Available | - | 1090207 - 1091721 | 56624.4 |
| electron transfer flavoprotein fixa | E1729_05330 | Not Available | + | 1092194 - 1092964 | 27173.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism