Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | E1729_05235 | Not Available | - | 1070209 - 1070472 | 9684.94 |
| duf2575 domain-containing protein | E1729_05240 | Not Available | + | 1070575 - 1070793 | 7975.96 |
| bifunctional riboflavin kinase/fad synthetase | E1729_05245 | Not Available | + | 1070801 - 1071742 | 34736.4 |
| isoleucine--trna ligase | E1729_05250 | Not Available | + | 1071785 - 1074601 | 104374.0 |
| lipoprotein signal peptidase | E1729_05255 | Not Available | + | 1074601 - 1075095 | 18127.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | E1729_05260 | Not Available | + | 1075203 - 1075652 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | E1729_05265 | Not Available | + | 1075654 - 1076604 | 34776.6 |
| ribonucleoside hydrolase rihc | E1729_05270 | Not Available | + | 1076670 - 1077584 | 32611.7 |
| duf805 domain-containing protein | E1729_05275 | Not Available | + | 1077607 - 1077972 | 13645.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | E1729_05280 | Not Available | + | 1078133 - 1078954 | 28772.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism